Publications

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Boateng, N. K. K., Wimberley, R., Rose, J., D’Alessandro, A., Cohen, M., Moore, E., Schmitt, L., Poole, L., Luyendyk, J., & Hansen, K. (2026). Tissue transglutaminase drives fibrin β-chain cross-linking: A novel fibrin modification observed in patients with trauma. Blood, 147(1), 87–92. https://doi.org/10.1182/blood.2025029458

Cohen, M. J., Erickson, C. B., Lacroix, I. S., Debot, M., Dzieciatkowska, M., Sen, S., Schaid, T. R., Gallagher, L. T., Hallas, W. M., Thielen, O. N., Cralley, A. L., Stocker, B. W., Ramser, B. J., Mokhtari, A., Baig, H., Sublette, C., Iheagwam, F., Caldwell-McGee, A., Cole, J., … Hansen, K. C. (2026). Multiomic analyses of longitudinal plasma samples identify thromboinflammation endotypes and trajectories in patients with trauma. Science Translational Medicine, 18(836), eadw5223. https://doi.org/10.1126/scitranslmed.adw5223

Dzieciatkowska, M., Hay, A., Issaian, A., Keele, G. R., Bevers, S., Nemkov, T., Reisz, J. A., Maslanka, M., Stephenson, D., Moore, A. L., Deng, X., Stone, M., Hansen, K. C., Kleinman, S., Norris, P. J., Busch, M. P., Page, G. P., Roubinian, N., Xia, Y., … D’Alessandro, A. (2026). Caffeine impairs red blood cell storage quality by dual inhibition of ADORA2b signaling and G6PD activity. Haematologica, 111(3), 861–875. https://doi.org/10.3324/haematol.2025.288332

Keele, G. R., Dzieciatkowska, M., Hay, A. M., Vincent, M., O’Connor, C., Stephenson, D., Reisz, J. A., Nemkov, T., Hansen, K. C., Page, G. P., Zimring, J. C., Churchill, G. A., & D’Alessandro, A. (2026). Genetic architecture of the murine red blood cell proteome reveals central role of hemoglobin beta cysteine 93 in maintaining redox balance. Cell Genomics, 6(3), 101069. https://doi.org/10.1016/j.xgen.2025.101069

Lee, E., Redzic, J. S., Gordon, B., Saviola, A. J., Tran, N., Maroney, S. P., Ashby, N. L., Shaw, S., Fulte, S., McCarty, A., Holyoak, T., Meyer, N., Hansen, K. C., Clark, S. E., & Eisenmesser, E. (2026). Streptococcus pneumoniae HtrA is a dynamic and monomeric virulence factor capable of forming larger oligomeric complexes. Protein Science : A Publication of the Protein Society, 35(1), e70411. https://doi.org/10.1002/pro.70411

Moore, P. K., Moore, E. E., Garner, R., Hansen, K., Barrett, C. D., Sauaia, A., Chandler, J., Janssen, W. J., & Moore, H. B. (2026). Coagulation factor XIII: An unrecognized regulator of fibrinolytic phenotypes in trauma-A potential link to cysteine cathepsin degradation of plasminogen. The Journal of Trauma and Acute Care Surgery, 100(2), 271–280. https://doi.org/10.1097/TA.0000000000004706

Oshima, K., Yan, B., Tao, R., Amorim, G., Di Gravio, C., McMurtry, S. A., Burke, R. C., Nam, Y., Nikolli, I., Kravitz, M. S., Stephenson, D., Issaian, A., Hansen, K. C., D’Alessandro, A., Douglas, I. S., Self, W. H., Lindsell, C. J., Leroux, C., Ringor, A., … Schmidt, E. P. (2026). Plasma chondroitin sulfate predicts the effectiveness of fluid resuscitation strategies in patients with sepsis. The Journal of Clinical Investigation, e202480. https://doi.org/10.1172/JCI202480

Piper, M., Hodgson, C. A., Gadwa, J., Hoen, M., Knitz, M. W., Yu, J., Corbo, S., Olimpo, N. A., Yee, E. J., Zhu, Y., Larson, K. Y., Klein, C., Amann, M., Saviola, A. J., & Karam, S. D. (2026). IL15/IL15Rα Complex Induces an Antitumor Immune Response following Radiotherapy only in the Absence of Tregs and Fails to Expand Progenitor TCF1+ CD8 T Cells. Molecular Cancer Therapeutics, 25(1), 168–182. https://doi.org/10.1158/1535-7163.MCT-24-0900

Thielen, O., Erickson, C., Stocker, B., Schaid, T. R., Gallagher, L. T., Dickinson, K., Ramser, B., Sen, S., Hansen, K., & Moore, E. (2026). Thromboinflammatory mediators produced by hyperfibrinolysis following injury. The Journal of Trauma and Acute Care Surgery, 100(3), 460–468. https://doi.org/10.1097/TA.0000000000004792

Abdelazeem, K. N. M., Nguyen, D., Corbo, S., Darragh, L. B., Matsumoto, M. W., Van Court, B., Neupert, B., Yu, J., Olimpo, N. A., Osborne, D. G., Gadwa, J., Ross, R. B., Nguyen, A., Bhatia, S., Kapoor, M., Friedman, R. S., Jacobelli, J., Saviola, A. J., Knitz, M. W., … Karam, S. D. (2025). Manipulating the EphB4-ephrinB2 axis to reduce metastasis in HNSCC. Oncogene, 44(3), 130–146. https://doi.org/10.1038/s41388-024-03208-9

Bamberg, E. E., Maslanka, M., Vinod-Paul, K., Sams, S., Pollack, E., Conklin, M., Kabos, P., & Hansen, K. C. (2025). Corrigendum to “Obesity-driven changes in breast extracellular matrix exhibit a pro-angiogenic phenotype” [Matrix Biol. Plus 24 (2024) 100162]. Matrix Biology Plus, 28, 100178. https://doi.org/10.1016/j.mbplus.2025.100178

Barrett, A., Maslanka, M. D., Darula, Z., McCabe, M. C., Saviola, A. J., Schmitt, L. R., Weaver, V., Pitts, T. M., Messersmith, W. A., & Hansen, K. C. (2025). Pancreatic Cancer Progression Involves Increased Lysyl Oxidase-Mediated Collagen Cross-Links as Part of the Desmoplastic Reaction. Biochemistry, 64(16), 3515–3525. https://doi.org/10.1021/acs.biochem.5c00125

Borja, M., Castañeda-Gaytán, G., Alagón, A., Strickland, J. L., Parkinson, C. L., Gutiérrez-Martínez, A., Rodriguez-López, B., Zarzosa, V., Lomonte, B., Saviola, A. J., Fernández, J., Smith, C. F., Hansen, K. C., Pérez-Robles, A., Castañeda-Pérez, S., Hirst, S. R., Olvera-Rodríguez, F., Fernández-Badillo, L., Sigala, J., … Neri-Castro, E. (2025). Venom variation and ontogenetic changes in the Crotalus molossus complex: Insights into composition, activities, and antivenom neutralization. Comparative Biochemistry and Physiology. Toxicology & Pharmacology : CBP, 290, 110129. https://doi.org/10.1016/j.cbpc.2025.110129

Campaña, M. B., Perkins, M. R., McCabe, M. C., Neumann, A., Larson, E. D., & Fantauzzo, K. A. (2025). PDGFRα/β heterodimer activation negatively affects downstream ERK1/2 signaling and cellular proliferation. Nature Communications, 16(1), 4754. https://doi.org/10.1038/s41467-025-59938-1

Cendali, F. I., Grier, A. L., Lisk, C., Dzieciatkowska, M., Haiman, Z., Reisz, J. A., Harral, J., Stephenson, D., Hay, A. M., Wartchow, E. P., Buehler, P. W., Hansen, K. C., Nemkov, T., Zimring, J. C., Irwin, D. C., & D’Alessandro, A. (2025). Increased Exercise Tolerance in G6PD African Variant Mice Driven by Metabolic Adaptations and Erythrophagocytosis. Antioxidants (Basel, Switzerland), 14(8). https://doi.org/10.3390/antiox14080927

Cendali, F. I., Lisk, C., Dzieciatkowska, M., LaCroix, I. S., Reisz, J. A., Harral, J., Stephenson, D., Hay, A. M., Wartchow, E. P., Darehshouri, A., Dziewulska-Cronk, K. H., Buehler, P. W., Norris, P. J., Deng, X., Busch, M. P., Earley, E. J., Page, G. P., Hansen, K. C., Zimring, J. C., … D’Alessandro, A. (2025). Increased exercise tolerance in humanized G6PD-deficient mice. Blood Advances, 9(2), 321–334. https://doi.org/10.1182/bloodadvances.2024013968

Chakraborty, N., Momirov, J., Radakovic, A., Chatterjee, S., Kirchhoff, A. M., Kolb, A.-L., West, T. J., Sanchez, B. B., Martinez-Bartolome, S., Saviola, A., McClatchy, D., Yates, J. R. 3rd, Chen, J. S., Lairson, L. L., Felding, B. H., & Boger, D. L. (2025). Insights into Free Drug Release from Efficacious N-Acyl O-Aminophenol Duocarmycin Prodrugs. ACS Chemical Biology. https://doi.org/10.1021/acschembio.4c00754

D’Alessandro, A., Keele, G. R., Hay, A., Nemkov, T., Earley, E. J., Stephenson, D., Vincent, M., Deng, X., Stone, M., Dzieciatkowska, M., Hansen, K. C., Kleinman, S., Spitalnik, S. L., Roubinian, N., Norris, P. J., Busch, M. P., Page, G. P., Stockwell, B. R., Churchill, G. A., & Zimring, J. C. (2025). Ferroptosis regulates hemolysis in stored murine and human red blood cells. Blood, 145(7), 765–783. https://doi.org/10.1182/blood.2024026109

Darula, Z., McCabe, M. C., Barrett, A., Schmitt, L. R., Maslanka, M. D., Saviola, A. J., Orgel, J., Burlingame, A., Staab-Weijnitz, C. A., Stenmark, K., Weaver, V., Chalkley, R. J., & Hansen, K. C. (2025). Proteomic characterization of type I collagen N-terminal crosslinked peptides. Matrix Biology Plus, 27, 100179. https://doi.org/10.1016/j.mbplus.2025.100179

De León, M. E., Fox, E. G. P., Dunaj, S., Jenner, R. A., Keiser, C. N., Macrander, J., Nixon, S. A., Nobile, C. J., Petras, D., Rodriguez-Roman, E., Saviola, A. J., Trim, S. A., Varona, N. S., Yeager, J., Ul-Hasan, S., Herzig, V., & Colston, T. J. (2025). A review of the venom microbiome and its utility in ecology and evolution including future directions for emerging research. Symbiosis (Philadelphia, Pa.), 95(1), 3–27. https://doi.org/10.1007/s13199-024-01031-0

Erickson, B., Fedoryshchak, R., Fong, N., Sheridan, R., Larson, K. Y., Saviola, A. J., Mouilleron, S., Hansen, K. C., Treisman, R., & Bentley, D. L. (2025). PP1/PNUTS phosphatase binds the restrictor complex and stimulates RNA Pol II transcription termination. Cell Reports, 44(5), 115564. https://doi.org/10.1016/j.celrep.2025.115564

Fresa, K. J., Cheng, M.-H., Larson, K. Y., Crook, A. A., Saviola, A. J., Gonzalez-Castro, R. A., Chen, T. W., & Carnevale, E. M. (2025). Delayed blastocyst development is associated with altered metabolism and proteome in male and female bovine embryos†. Biology of Reproduction, 112(6), 1072–1085. https://doi.org/10.1093/biolre/ioaf058

Ginocchio, S., McCabe, M. C., Flockton, A. R., Gumina, D. L., Hansen, K. C., Ji, S., & Su, E. J. (2025a). Unraveling the Matrix: Proteomic Profiling Reveals Stromal ECM Dysregulation in Severe Early-Onset Fetal Growth Restriction. International Journal of Molecular Sciences, 26(22). https://doi.org/10.3390/ijms262211179

Ginocchio, S., McCabe, M. C., Flockton, A. R., Gumina, D. L., Hansen, K. C., Ji, S., & Su, E. J. (2025b). Unraveling the Matrix: Proteomic Profiling Reveals Stromal ECM Dysregulation in Severe Early-Onset Fetal Growth Restriction. International Journal of Molecular Sciences, 26(22). https://doi.org/10.3390/ijms262211179

Gomes, F. P., Durbin, K. R., Schauer, K., Nwachukwu, J. C., R Kobylski, R., Njeri, J. W., Seath, C. P., Saviola, A. J., McClatchy, D. B., Diedrich, J. K., Garrett, P. T., Papa, A. B., Ciolacu, I., Kelleher, N. L., Nettles, K. W., & Yates, J. R. 3rd. (2025). Native top-down proteomics enables discovery in endocrine-resistant breast cancer. Nature Chemical Biology, 21(8), 1205–1213. https://doi.org/10.1038/s41589-025-01866-8

Hasenauer, A., Bevc, K., McCabe, M. C., Chansoria, P., Saviola, A. J., Hansen, K. C., Christman, K. L., & Zenobi-Wong, M. (2025). Volumetric printed biomimetic scaffolds support in vitro lactation of human milk-derived mammary epithelial cells. Science Advances, 11(23), eadu5793. https://doi.org/10.1126/sciadv.adu5793

Herrera, J. A., Maslanka, M., Blumhagen, R. Z., Blomberg, R., Lwin, N. Y., Brancato, J., Cool, C. D., Huber, J. P., Kurche, J. S., Magin, C. M., Hansen, K. C., Yang, I. V., & Schwartz, D. A. (2025). The MUC5B promoter variant results in proteomic changes in the nonfibrotic lung. JCI Insight, 10(14). https://doi.org/10.1172/jci.insight.189636

Kellett, M. D., Sharma, V., Sherlock, M. E., Pugazhenthi, U., Rose, M. M., Joshi, M. U., Dzieciatkowska, M., Nguyen, V., Reigan, P., Hansen, K. C., Kieft, J. S., & Schweppe, R. E. (2025). Focal adhesion kinase promotes ribosome biogenesis to drive advanced thyroid cancer cell growth and survival. Frontiers in Oncology, 15, 1252544. https://doi.org/10.3389/fonc.2025.1252544

Key, A. M., Earley, E. J., Tzounakas, V. L., Anastasiadi, A. T., Nemkov, T., Stephenson, D., Dzieciatkowska, M., Reisz, J. A., Keele, G. R., Deng, X., Stone, M., Kleinman, S., Hansen, K. C., Norris, P. J., Busch, M. P., Roubinian, N. H., Page, G. P., & D’Alessandro, A. (2025). Red blood cell urate levels are linked to hemolysis in vitro and post-transfusion as a function of donor sex, population and genetic polymorphisms in SLC2A9 and  ABCG2. Transfusion. https://doi.org/10.1111/trf.18140

Kim, C., Smith, S. N., Gopalan, S. S., Kerwin, S. R., Ballard, K., Perry, B. W., Smith, C. F., Saviola, A. J., Adams, R. H., Mackessy, S. P., & Castoe, T. A. (2025). Unique physiological and regulatory activity drives divergent toxin and non-toxin gene expression in rattlesnake accessory venom glands. Toxicon : Official Journal of the International Society on Toxinology, 259, 108376. https://doi.org/10.1016/j.toxicon.2025.108376

LaCroix, I. S., Dzieciatkowska, M., Cendali, F., Sanders, K., Wade, C. E., Cotton, B. A., Cohen, M. J., D’Alessandro, A., Hansen, K., & Cardenas, J. C. (2025). Multiomics reveal plasma constituents associated with thrombosis among trauma patients who do not respond to enoxaparin. Blood Vessels, Thrombosis & Hemostasis, 2(4), 100102. https://doi.org/10.1016/j.bvth.2025.100102

Lee, E., Redzic, J. S., Gordon, B., Saviola, A. J., Tran, N., Maroney, S. P., Ashby, N. L., Shaw, S., Fulte, S., McCarty, A., Holyoak, T., Meyer, N., Hansen, K. C., Clark, S. E., & Eisenmesser, E. (2026). Streptococcus pneumoniae HtrA is a dynamic and monomeric virulence factor capable of forming larger oligomeric complexes. Protein Science : A Publication of the Protein Society, 35(1), e70411. https://doi.org/10.1002/pro.70411

Lee, E., Saviola, A., Bevers, S., Redzic, J. S., Maroney, S. P., Shaw, S., Tamkin, E., Fulte, S., Nemkov, T., Meyer, N., D’Alessandro, A., Hansen, K. C., Clark, S. E., & Eisenmesser, E. (2025). Streptococcus pneumoniae GAPN is a key metabolic player necessary for host infection. Protein Science : A Publication of the Protein Society, 34(1), e5253. https://doi.org/10.1002/pro.5253

McCabe, M. C., Okamura, D. M., Erickson, C. B., Perry, B. W., Brewer, C. M., Nguyen, E. D., Saviola, A. J., Majesky, M. W., & Hansen, K. C. (2025). ECM-Focused Proteomic Analysis of Ear Punch Regeneration in Acomys cahirinus. Journal of Proteome Research, 24(7), 3202–3220. https://doi.org/10.1021/acs.jproteome.4c00810

Mokhonova, E. I., Helzer, D., Malik, R., Mamsa, H., Walker, J., Maslanka, M., Fleser, T. S., Afsharinia, M. H., Liu, S., Holmberg, J., Zhou, Z. H., Deeds, E. J., Hansen, K. C., McNally, E. M., & Crosbie, R. H. (2025). Sarcospan protects against LGMD R5 via remodeling of the sarcoglycan complex composition in dystrophic mice. The Journal of Clinical Investigation, 135(17). https://doi.org/10.1172/JCI187868

Nishida-Aoki, N., Zhu, S., Chan, M., Kang, Y., Fujita, M., Jiang, X., McCabe, M., Vaz, J. M., Davidson, N. E., Ghajar, C. M., Hansen, K., Welm, A. L., Pillarisetty, V. G., & Gujral, T. S. (2025). Drug screening in 3D microtumors reveals DDR1/2-MAPK12-GLI1 as a vulnerability in cancer-associated fibroblasts. Cell Reports. Medicine, 6(10), 102357. https://doi.org/10.1016/j.xcrm.2025.102357

Oldham, D., Saviola, A., Alvarez, E., & Bruce, K. D. (2025). Proteomic analysis of cerebrospinal fluid from females with multiple sclerosis highlights elevated microglial function and impaired neurogenesis. IBRO Neuroscience Reports, 19, 624–631. https://doi.org/10.1016/j.ibneur.2025.08.020

Oshima, K., Di Gravio, C., Yan, B., McMurtry, S. A., Burke, R., Levoir, L. M., Kravitz, M. S., Stephenson, D., Issaian, A., Hansen, K. C., D’Alessandro, A., Douglas, I. S., Self, W. H., Lindsell, C. J., Schildcrout, J. S., Schmidt, E. P., & Shapiro, N. I. (2025). Endothelial Glycocalyx Degradation in Sepsis: Analysis of the Crystalloid Liberal or Vasopressors Early Resuscitation in Sepsis (CLOVERS) Trial, a Multicenter,  Phase 3, Randomized Trial. Annals of the American Thoracic Society, 22(9), 1382–1393. https://doi.org/10.1513/AnnalsATS.202501-012OC

Pham-Danis, C., Chia, S. B., Scarborough, H. A., Danis, E., Nemkov, T., Zaberezhnyy, V., Christenson, J. L., Kleczko, E. K., Navarro, A., Goodspeed, A., Bonney, E. A., Dinarello, C. A., Marchetti, C., Nemenoff, R. A., Hansen, K. C., & DeGregori, J. (2025). Inflammation Promotes Aging-Associated Oncogenesis in the Lung. Aging and Cancer, 6(1), 3–18. https://doi.org/10.1002/aac2.12077

Piper, M., Hodgson, C. A., Gadwa, J., Hoen, M., Knitz, M. W., Yu, J., Corbo, S., Olimpo, N. A., Yee, E. J., Zhu, Y., Larson, K. Y., Klein, C., Amann, M., Saviola, A. J., & Karam, S. D. (2026). IL15/IL15Rα Complex Induces an Antitumor Immune Response following Radiotherapy only in the Absence of Tregs and Fails to Expand Progenitor TCF1+ CD8 T Cells. Molecular Cancer Therapeutics, 25(1), 168–182. https://doi.org/10.1158/1535-7163.MCT-24-0900

Puiggalí-Jou, A., Hui, I., Baldi, L., Frischknecht, R., Asadikorayem, M., Janiak, J., Chansoria, P., McCabe, M. C., Stoddart, M. J., Hansen, K. C., Christman, K. L., & Zenobi-Wong, M. (2025). Biofabrication of anisotropic articular cartilage based on decellularized extracellular matrix. Biofabrication, 17(1). https://doi.org/10.1088/1758-5090/ad9cc2

Reisz, J. A., Earley, E. J., Nemkov, T., Key, A., Stephenson, D., Keele, G. R., Dzieciatkowska, M., Spitalnik, S. L., Hod, E. A., Kleinman, S., Roubinian, N. H., Gladwin, M. T., Hansen, K. C., Norris, P. J., Busch, M. P., Zimring, J. C., Churchill, G. A., Page, G. P., & D’Alessandro, A. (2025). Arginine metabolism is a biomarker of red blood cell and human aging. Aging Cell, 24(2), e14388. https://doi.org/10.1111/acel.14388

Reitsma, S. E., Barsoum, J. R., Hansen, K. C., Sassin, A. M., Dzieciatkowska, M., James, A. H., Aagaard, K. M., Ahmadzia, H. K., & Wolberg, A. S. (2025). Agnostic identification of plasma biomarkers for postpartum hemorrhage risk. American Journal of Obstetrics and Gynecology, 232(2), 220.e1-220.e18. https://doi.org/10.1016/j.ajog.2024.04.050

Schaid, T. R. J., Erickson, C., D’Alessandro, A., Hansen, K., Thielen, O., Hallas, W., Gallagher, L., Cralley, A., LaCroix, I., Ramser, B., Stocker, B., Mitra, S., Stafford, P., Dzieciatkowska, M., Silliman, C., & Cohen, M. (2025). Obesity influences the biological response to injury: A multi-omics analysis. European Journal of Trauma and Emergency Surgery : Official Publication of the European Trauma Society, 51(1), 238. https://doi.org/10.1007/s00068-025-02922-7

Schaid, T. R. J., Mitra, S., Stafford, P., DeBot, M., Thielen, O., Hallas, W., Cralley, A., Gallagher, L., Jeffrey, D., Hansen, K. C., D’Alessandro, A., Silliman, C. C., Dabertrand, F., & Cohen, M. J. (2025). Endothelial Cell Calcium Influx Mediates Trauma-induced Endothelial Permeability. Annals of Surgery, 281(4), 671–681. https://doi.org/10.1097/SLA.0000000000006164

Sieh, L., Peasley, E., Mao, E., Mitchell, A., Heinonen, G., Ghoshal, S., Agarwal, S., Park, S., Connolly, E. S., Claassen, J., Moore, E. E., Hansen, K., Hod, E. A., Francis, R. O., & Roh, D. J. (2025). Admission Viscoelastic Hemostatic Assay Parameters Predict Poor Long-Term Intracerebral Hemorrhage Outcomes. Neurocritical Care, 42(1), 100–107. https://doi.org/10.1007/s12028-024-02051-w

Smith, C. F., Baldé, M. A., French, S., Modahl, C. M., Bahrabadi, L., Amponsah-Asamoah, M., Larson, K. Y., Maroney, S. P., Galindo, D. C., Millimouno, M., Camara, N., Benjamin, J., Brandehoff, N. P., McCabe, M. C., Cohen, M. J., Jackson, K., Baldé, C., Castoe, T. A., Mackessy, S. P., … Saviola, A. J. (2025). Discerning specific thrombolytic activities and blood clot degradomes of diverse snake venoms with untargeted peptidomics. Journal of Thrombosis and Haemostasis : JTH, 23(7), 2198–2212. https://doi.org/10.1016/j.jtha.2025.03.012

Stegman, R. D., Schmitt, L. R., Hansen, K. C., Kayden, A., Ghosh, A., Metjian, A., & Wohlauer, M. V. (2025). Proteomics of arterial thrombi in acute limb ischemia. Journal of Thrombosis and Thrombolysis, 58(7), 866–881. https://doi.org/10.1007/s11239-025-03123-0

Thielen, O., Stafford, P., Debot, M., Kelher, M., Mitra, S., Hallas, W., Gallagher, L. T., Schaid, T., Stocker, B., Ramser, B., D’Alessandro, A., Hansen, K., Silliman, C. C., Moore, E., Mosnier, L., Griffin, J., & Cohen, M. (2025). Cytoprotective 3K3A-activated protein C and plasma: A comparison of therapeutics for the endotheliopathy of trauma. The Journal of Trauma and Acute Care Surgery, 98(1), 94–100. https://doi.org/10.1097/TA.0000000000004406

Van Zeeland, E. M., Kassel, B., Montoya, T., Saviola, A. J., Burton, L. H., Easley, J. T., Nelson, B. B., Santangelo, K. S., & Sikes, K. J. (2025). Structural, functional, and proteomic based sex differences in murine post-traumatic osteoarthritis development following mechanical anterior cruciate  ligament injury. Osteoarthritis and Cartilage, 33(8), 992–1006. https://doi.org/10.1016/j.joca.2025.05.004

Wei, Z., Boateng, N. K. K., Schmitt, L. R., Cline, H., Fernandes Fonseca, M. T., Newberry, A., Taylor, A., Adelmeijer, J., Poole, L. G., Stravitz, R. T., Lee, W. M., Lisman, T., Hansen, K. C., & Luyendyk, J. P. (2025). Integrated cross-linking by TG2 and FXIII generates hepatoprotective fibrin(ogen) deposits in injured liver. Blood, 145(21), 2507–2517. https://doi.org/10.1182/blood.2024026938

Zarzosa, V., Neri-Castro, E., Lomonte, B., Fernández, J., Rodríguez-Barrera, G., Rodríguez-López, B., Rodríguez-Solís, A. M., Olvera-Rodríguez, A., Bénard-Valle, M., Saviola, A., García-Vázquez, U. O., Fernández-Badillo, L., Morales-Capellán, N., Borja, M., Zamudio, F., & Alagón, A. (2025). Integrative transcriptomic, proteomic, biochemical and neutralization studies on the venom of Micrurus ephippifer. Journal of Proteomics, 316, 105416. https://doi.org/10.1016/j.jprot.2025.105416

Zelus, E. I., Grime, J., Saviola, A., McCabe, M., Hansen, K. C., Alperin, M., & Christman, K. L. (2025). Development of a Vaginal Extracellular Matrix Hydrogel for Combating Genitourinary Syndrome of Menopause. Advanced Materials (Deerfield Beach, Fla.), 37(39), e2419977. https://doi.org/10.1002/adma.202419977

Bamberg, E. E., Maslanka, M., Vinod-Paul, K., Sams, S., Pollack, E., Conklin, M., Kabos, P., & Hansen, K. C. (2024). Obesity-driven changes in breast tissue exhibit a pro-angiogenic extracellular matrix signature. Matrix Biology Plus, 24, 100162. https://doi.org/10.1016/j.mbplus.2024.100162

Bartlett, K. E., Hall, S. R., Rasmussen, S. A., Crittenden, E., Dawson, C. A., Albulescu, L.-O., Laprade, W., Harrison, R. A., Saviola, A. J., Modahl, C. M., Jenkins, T. P., Wilkinson, M. C., Gutiérrez, J. M., & Casewell, N. R. (2024). Dermonecrosis caused by a spitting cobra snakebite results from toxin potentiation and is prevented by the repurposed drug varespladib. Proceedings of the National Academy of Sciences of the United States of America, 121(19), e2315597121.  https://doi.org/10.1073/pnas.2315597121

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Calvete, J. J., Lomonte, B., Saviola, A. J., Calderón Celis, F., & Ruiz Encinar, J. (2024). Quantification of snake venom proteomes by mass spectrometry-considerations and perspectives. Mass Spectrometry Reviews, 43(5), 977–997. https://doi.org/10.1002/mas.21850

Chalivendra, S., Shi, S., Li, X., Kuang, Z., Giovinazzo, J., Zhang, L., Rossi, J., Wang, J., Saviola, A. J., Welty, R., Liu, S., Vaeth, K. F., Zhou, Z. H., Hansen, K. C., Taliaferro, J. M., & Zhao, R. (2024). Selected humanization of yeast U1 snRNP leads to global suppression of pre-mRNA splicing and mitochondrial dysfunction in the budding yeast. RNA (New York, N.Y.), 30(8), 1070–1088. https://doi.org/10.1261/rna.079917.123

Cleland, N. R. W., Potter, G. J., Buck, C., Quang, D., Oldham, D., Neal, M., Saviola, A., Niemeyer, C. S., Dobrinskikh, E., & Bruce, K. D. (2024). Altered metabolism and DAM-signatures in female brains and microglia with aging. Brain Research, 1829, 148772. https://doi.org/10.1016/j.brainres.2024.148772

Corbo, S., Nguyen, D., Bhatia, S., Darragh, L. B., Abdelazeem, K. N. M., Court, B. V., Olimpo, N. A., Gadwa, J., Yu, J., Hodgson, C., Samedi, V., Garcia, E. S., Siu, L., Saviola, A., Heasley, L. E., Knitz, M. W., Pasquale, E. B., & Karam, S. D. (2024). The pro-tumoral and anti-tumoral roles of EphA4 on T regulatory cells and tumor associated macrophages during HNSCC tumor progression. https://doi.org/10.1101/2024.08.13.607778

Cralley, A. L., Moore, E. E., LaCroix, I., Schaid, T. J., Thielen, O., Hallas, W., Hom, P., Mitra, S., Kelher, M., Hansen, K., Cohen, M., Silliman, C., Sauaia, A., & Fox, C. J. (2024). RESUSCITATIVE ENDOVASCULAR BALLOON OCCLUSION OF THE AORTA: ZONE 1 REPERFUSION-INDUCED COAGULOPATHY. Shock (Augusta, Ga.), 61(2), 322–329. https://doi.org/10.1097/SHK.0000000000002299

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Gopalan, S. S., Perry, B. W., Francioli, Y. Z., Schield, D. R., Guss, H. D., Bernstein, J. M., Ballard, K., Smith, C. F., Saviola, A. J., Adams, R. H., Mackessy, S. P., & Castoe, T. A. (2024). Diverse Gene Regulatory Mechanisms Alter Rattlesnake Venom Gene Expression at Fine Evolutionary Scales. Genome Biology and Evolution, 16(7). https://doi.org/10.1093/gbe/evae110

Kheyfets, V. O., Sweatt, A. J., Zhang, H., Nemkov, T., Heerdt, P., Dzieciatkowska, M., Stephenson, D., LaCroix, I. S., D’Alessandro, A., Oldham, W. M., Hansen, K., Zamanian, R. T., & Stenmark, K. R. (2024). Identification of candidate biomarkers and molecular networks associated with Pulmonary Arterial Hypertension using machine learning and plasma multi-Omics  analysis. In medRxiv: The preprint server for health sciences (p. 2024.12.17.24319117). https://doi.org/10.1101/2024.12.17.24319117

Kotz, J., Martz, E. J., Nelson, M., Savoie, N., Schmitt, L., States, J., Holton, N., Hansen, K., & Johnson, A. M. (2024). Novel interactions within the silent information regulator heterochromatin complex potentiate inter-subunit communication and gene repression. https://doi.org/10.1101/2024.12.23.630195

LaCroix, I. S., Moore, E. E., Cralley, A., Cendali, F. I., Dzieciatkowska, M., Hom, P., Mitra, S., Cohen, M., Silliman, C., Hansen, K. C., & D’Alessandro, A. (2024). Multiomics Signatures of Coagulopathy in a Polytrauma Swine Model Contrasted with Severe Multisystem Injured Patients. Journal of Proteome Research, 23(4), 1163–1173. https://doi.org/10.1021/acs.jproteome.3c00581

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McCabe, M. C., Saviola, A. J., & Hansen, K. C. (2024). Compartment-Resolved Proteomics with Deep Extracellular Matrix Coverage. Bio-Protocol, 14(23), e5123. https://doi.org/10.21769/BioProtoc.5123

Nemkov, T., Cendali, F., Dzieciatkowska, M., Stephenson, D., Hansen, K. C., Jankowski, C. M., D’Alessandro, A., & Marker, R. J. (2024). A Multiomics Assessment of Preoperative Exercise in Pancreatic Cancer Survivors Receiving Neoadjuvant Therapy: A Case Series. Pathophysiology : The Official Journal of the International Society for Pathophysiology, 31(1), 166–182. https://doi.org/10.3390/pathophysiology31010013

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Nemkov, T., Stephenson, D., Erickson, C., Dzieciatkowska, M., Key, A., Moore, A., Earley, E. J., Page, G. P., Lacroix, I. S., Stone, M., Deng, X., Raife, T., Kleinman, S., Zimring, J. C., Roubinian, N., Hansen, K. C., Busch, M. P., Norris, P. J., & D’Alessandro, A. (2024). Regulation of kynurenine metabolism by blood donor genetics and biology impacts red cell hemolysis in vitro and in vivo. Blood, 143(5), 456–472. https://doi.org/10.1182/blood.2023022052

Niemeyer, C. S., Frietze, S., Coughlan, C., Lewis, S. W. R., Bustos Lopez, S., Saviola, A. J., Hansen, K. C., Medina, E. M., Hassell, J. E. J., Kogut, S., Traina-Dorge, V., Nagel, M. A., Bruce, K. D., Restrepo, D., Mahalingam, R., & Bubak, A. N. (2024). Suppression of the host antiviral response by non-infectious varicella zoster virus extracellular vesicles. Journal of Virology, 98(8), e0084824. https://doi.org/10.1128/jvi.00848-24

Pham-Danis, C., Chia, S. B., Scarborough, H. A., Danis, E., Nemkov, T., Kleczko, E. K., Navarro, A., Goodspeed, A., Bonney, E. A., Dinarello, C. A., Marchetti, C., Nemenoff, R. A., Hansen, K., & DeGregori, J. (2024). Inflammation promotes aging-associated oncogenesis in the lung. https://doi.org/10.1101/2024.03.01.583044

Piper, M., Gadwa, J., Hodgson, C., Knitz, M., Yee, E., Zhu, Y., Larson, K. Y., Klein, C., Amann, M., Saviola, A., & Karam, S. D. (2024). IL15/IL15Rα complex induces an anti-tumor immune response following radiation therapy only in the absence of Tregs and fails to induce expansion of progenitor  TCF1+ CD8 T cells. https://doi.org/10.1101/2024.09.18.613691

Ross, R. B., Gadwa, J., Yu, J., Darragh, L. B., Knitz, M. W., Nguyen, D., Olimpo, N. A., Abdelazeem, K. N. M., Nguyen, A., Corbo, S., Van Court, B., Beynor, J., Neupert, B., Saviola, A. J., D’Alessandro, A., & Karam, S. D. (2024). PPARα Agonism Enhances Immune Response to Radiotherapy While Dietary Oleic Acid Results in Counteraction. Clinical Cancer Research : An Official Journal of the American Association for Cancer Research, 30(9), 1916–1933. https://doi.org/10.1158/1078-0432.CCR-23-3433

Smith, C. F., Modahl, C. M., Ceja Galindo, D., Larson, K. Y., Maroney, S. P., Bahrabadi, L., Brandehoff, N. P., Perry, B. W., McCabe, M. C., Petras, D., Lomonte, B., Calvete, J. J., Castoe, T. A., Mackessy, S. P., Hansen, K. C., & Saviola, A. J. (2024). Assessing Target Specificity of the Small Molecule Inhibitor MARIMASTAT to Snake Venom Toxins: A Novel Application of Thermal Proteome Profiling. Molecular & Cellular Proteomics : MCP, 23(6), 100779. https://doi.org/10.1016/j.mcpro.2024.100779

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Stocker, B. W., LaCroix, I. S., Erickson, C., Gallagher, L. T., Ramser, B. J., Thielen, O., Hallas, W., Mitra, S., Moore, E. E., Hansen, K., D’Alessandro, A., Silliman, C. C., & Cohen, M. J. (2024). Trauma patients with type O blood exhibit unique multiomics signature with decreased lectin pathway of complement levels. The Journal of Trauma and Acute Care Surgery, 97(5), 753–763. https://doi.org/10.1097/TA.0000000000004367

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Upadhyay, V., Ray, S., Panja, S., Saviola, A. J., Maluf, N. K., & Mallela, K. M. G. (2024). Biophysical characterization of the dystrophin C-terminal domain: Dystrophin interacts differentially with dystrobrevin isoforms. The Journal of Biological Chemistry, 300(12), 108002. https://doi.org/10.1016/j.jbc.2024.108002

Van Court, B., Ciccaglione, M., Neupert, B., Knitz, M. W., Maroney, S. P., Nguyen, D., Abdelazeem, K. N. M., Exner, A. A., Saviola, A. J., Benninger, R. K. P., & Karam, S. D. (2024). Heterogeneous Kinetics of Nanobubble Ultrasound Contrast Agent and Angiogenic Signaling in Head and Neck Cancer. https://doi.org/10.1101/2024.09.22.614362

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Duran, P., Boscolo Sesillo, F., Cook, M., Burnett, L., Menefee, S. A., Do, E., French, S., Zazueta-Damian, G., Dzieciatkowska, M., Saviola, A. J., Shah, M. M., Sanvictores, C., Osborn, K. G., Hansen, K. C., Shtrahman, M., Christman, K. L., & Alperin, M. (2023). Proregenerative extracellular matrix hydrogel mitigates pathological alterations of pelvic skeletal muscles after birth injury. Science Translational Medicine, 15(707), eabj3138. https://doi.org/10.1126/scitranslmed.abj3138

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Lee, E., Redzic, J. S., Saviola, A. J., Li, X., Ebmeier, C. C., Kutateladze, T., Hansen, K. C., Zhao, R., Ahn, N., Sluchanko, N. N., & Eisenmesser, E. (2023). Molecular insight into the specific interactions of the SARS-Coronavirus-2 nucleocapsid with RNA and host protein. Protein Science : A Publication of the Protein Society, 32(4), e4603. https://doi.org/10.1002/pro.4603

McCabe, M. C., Gejji, V., Barnebey, A., Siuzdak, G., Hoang, L. T., Pham, T., Larson, K. Y., Saviola, A. J., Yannone, S. M., & Hansen, K. C. (2023). From volcanoes to the bench: Advantages of novel hyperthermoacidic archaeal proteases for proteomics workflows. Journal of Proteomics, 289, 104992. https://doi.org/10.1016/j.jprot.2023.104992

McCabe, M. C., Saviola, A. J., & Hansen, K. C. (2023). Mass Spectrometry-Based Atlas of Extracellular Matrix Proteins across 25 Mouse Organs. Journal of Proteome Research, 22(3), 790–801. https://doi.org/10.1021/acs.jproteome.2c00526

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Frid, M. G., Thurman, J. M., Hansen, K. C., Maron, B. A., & Stenmark, K. R. (2020). Inflammation, immunity, and vascular remodeling in pulmonary hypertension; Evidence for complement involvement? Global Cardiology Science & Practice, 2020(1), e202001. https://doi.org/10.21542/gcsp.2020.1

 

Hernandez, M. J., Yakutis, G. E., Zelus, E. I., Hill, R. C., Dzieciatkowska, M., Hansen, K. C., & Christman, K. L. (2020). Manufacturing considerations for producing and assessing decellularized extracellular matrix hydrogels. Methods (San Diego, Calif.), 171, 20–27. https://doi.org/10.1016/j.ymeth.2019.09.015

 

Jordan, K. R., Hall, J. K., Schedin, T., Borakove, M., Xian, J. J., Dzieciatkowska, M., Lyons, T. R., Schedin, P., Hansen, K. C., & Borges, V. F. (2020). Extracellular vesicles from young women’s breast cancer patients drive increased invasion of non-malignant cells via the Focal Adhesion Kinase pathway: A  proteomic approach. Breast Cancer Research : BCR, 22(1), 128. https://doi.org/10.1186/s13058-020-01363-x

 

Li, J., Narayanan, K., Zhang, Y., Hill, R. C., He, F., Hansen, K. C., & Pei, M. (2020). Role of lineage-specific matrix in stem cell chondrogenesis. Biomaterials, 231, 119681. https://doi.org/10.1016/j.biomaterials.2019.119681

 

McCabe, M. C., Hill, R. C., Calderone, K., Cui, Y., Yan, Y., Quan, T., Fisher, G. J., & Hansen, K. C. (2020). Alterations in extracellular matrix composition during aging and photoaging of the skin. Matrix Biology Plus, 8, 100041. https://doi.org/10.1016/j.mbplus.2020.100041

 

Miszta, A., Kopec, A. K., Pant, A., Holle, L. A., Byrnes, J. R., Lawrence, D. A., Hansen, K. C., Flick, M. J., Luyendyk, J. P., de Laat, B., & Wolberg, A. S. (2020). A high-fat diet delays plasmin generation in a thrombomodulin-dependent manner in mice. Blood, 135(19), 1704–1717. https://doi.org/10.1182/blood.2019004267

 

Naranjo, J. D., Saldin, L. T., Sobieski, E., Quijano, L. M., Hill, R. C., Chan, P. G., Torres, C., Dziki, J. L., Cramer, M. C., Lee, Y. C., Das, R., Bajwa, A. K., Nossair, R., Klimak, M., Marchal, L., Patel, S., Velankar, S. S., Hansen, K. C., McGrath, K., & Badylak, S. F. (2020). Esophageal extracellular matrix hydrogel mitigates metaplastic change in a dog model of Barrett’s esophagus. Science Advances, 6(27), eaba4526. https://doi.org/10.1126/sciadv.aba4526

 

Northey, J. J., Barrett, A. S., Acerbi, I., Hayward, M.-K., Talamantes, S., Dean, I. S., Mouw, J. K., Ponik, S. M., Lakins, J. N., Huang, P.-J., Wu, J., Shi, Q., Samson, S., Keely, P. J., Mukhtar, R. A., Liphardt, J. T., Shepherd, J. A., Hwang, E. S., Chen, Y.-Y., … Weaver, V. M. (2020). Stiff stroma increases breast cancer risk by inducing the oncogene ZNF217. The Journal of Clinical Investigation, 130(11), 5721–5737. https://doi.org/10.1172/JCI129249

 

Pini, T., Parks, J., Russ, J., Dzieciatkowska, M., Hansen, K. C., Schoolcraft, W. B., & Katz-Jaffe, M. (2020). Obesity significantly alters the human sperm proteome, with potential implications for fertility. Journal of Assisted Reproduction and Genetics, 37(4), 777–787. https://doi.org/10.1007/s10815-020-01707-8

 

Tarullo, S. E., Hill, R. C., Hansen, K. C., Behbod, F., Borges, V. F., Nelson, A. C., & Lyons, T. R. (2020). Postpartum breast cancer progression is driven by semaphorin 7a-mediated invasion and survival. Oncogene, 39(13), 2772–2785. https://doi.org/10.1038/s41388-020-1192-9

 

Thomas, T., Stefanoni, D., Dzieciatkowska, M., Issaian, A., Nemkov, T., Hill, R. C., Francis, R. O., Hudson, K. E., Buehler, P. W., Zimring, J. C., Hod, E. A., Hansen, K. C., Spitalnik, S. L., & D’Alessandro, A. (2020). Evidence of Structural Protein Damage and Membrane Lipid Remodeling in Red Blood Cells from COVID-19 Patients. Journal of Proteome Research, 19(11), 4455–4469. https://doi.org/10.1021/acs.jproteome.0c00606

Thomas, T., Stefanoni, D., Reisz, J. A., Nemkov, T., Bertolone, L., Francis, R. O., Hudson, K. E., Zimring, J. C., Hansen, K. C., Hod, E. A., Spitalnik, S. L., & D’Alessandro, A. (2020). COVID-19 infection alters kynurenine and fatty acid metabolism, correlating with IL-6 levels and renal status. JCI Insight, 5(14), 140327. https://doi.org/10.1172/jci.insight.140327

 

Thrivikraman, G., Johnson, S. L., Syedain, Z. H., Hill, R. C., Hansen, K. C., Lee, H. S., & Tranquillo, R. T. (2020). Biologically-engineered mechanical model of a calcified artery. Acta Biomaterialia, 110, 164–174. https://doi.org/10.1016/j.actbio.2020.04.018

 

Wang, T., Hill, R. C., Dzieciatkowska, M., Zhu, L., Infante, A. M., Hu, G., Hansen, K. C., & Pei, M. (2020). Site-Dependent Lineage Preference of Adipose Stem Cells. Frontiers in Cell and Developmental Biology, 8, 237. https://doi.org/10.3389/fcell.2020.00237