GEMM has extensive experience with the design of mice using engineered nucleases such as ZFNs, TALENs, and CRISPR/Cas9, with the vast majority of our projects using CRISPR/Cas9.
Common types of genetic modifications introduced by engineered nucleases like CRISPR/Cas9 include:
- deletions to generate knockout mice,
- small changes in DNA composition to introduce SNPs,
- the introduction of small molecular tags, including loxp sites. This can enable the tagging of a gene of interest or the generation of conditional knockout mice.
Less common requests include larger insertion and replacement events.
We frequently combine the CRISPR/Cas9 technology with IVF to enable genetic engineering directly in a wide range of background strains, including B6J, B6N, NOD, FVB, already genetically modified mice and others. Please inquire.
The general workflow for creating a gene edited mouse is as follows:
- Consultation- meet to discuss project goals.
- gRNA design- with information provided by the investigator, GEMM will design and generate CRISPR reagents for the production of mouse models or for investigator led efforts to modify cell lines.
- Simple- includes design of gRNA to drive a single dsDNA break for the introduction of SNPs, small tag knockins.
- Complex- includes the design of gRNA for dsDNA breaks at two locations in the genome, as necessary for conditional gene knockouts.
- gRNA activity testing- GEMM will test guide activity in vitro or in embryos cultured to blastocysts.
- HDR template design and synthesis- GEMM will design HDR templates, synthesize and prepare them for use. This may include ssODNs, long ssDNA, and the generation of AAV to deliver the desired HDR template.
- Microinjection or electroporation- GEMM will generate embryos by natural mating or by IVF, introduce gene editing reagents, and perform embryo transfers.
- Resulting pups will be genotyped to identify putative founders. Mice can be transferred to researcher at this stage or kept in our breeding program to establish germline transmission.